3Stocks managed with an alternative total allowable catch Empowered by s 14
| Bigeye tuna (Thunnus obesus) | All quota management areas | |
| Blue shark (Prionace glauca) | All quota management areas | |
| Green-lipped mussel (Perna canaliculus) | GLM7A and GLM9 | |
| Long-finned freshwater eel (Anguilla dieffenbachii) | LFE11, LFE12, LFE13, LFE14, LFE15, LFE16, LFE20, LFE21, LFE22, LFE23 | |
| Mako shark (Isurus oxyrinchus) | All quota management areas | |
| Moonfish (Lampris guttatus) | All quota management areas | |
| Pacific bluefin tuna (Thunnus orientalis) | All quota management areas | |
| Porbeagle shark (Lamna nasus) | All quota management areas | |
| Ray's bream (Brama brama) | All quota management areas | |
| Short-finned freshwater eel (Anguilla australis and Anguilla reinhardtii) | SFE11, SFE12, SFE13, SFE14, SFE15, SFE16, SFE20, SFE21, SFE22, SFE23 | |
| Southern bluefin tuna (Thunnus maccoyii) | All quota management areas | |
| Southern scallops (Pecten novaezelandiae) | Southern scallop fishery | |
| Squid (Nototodarus sloani; Nototodarus gouldi) | All quota management areas | |
| Swordfish (Xiphias gladius) | All quota management areas | |
| Yellowfin tuna (Thunnus albacares) | All quota management areas |
Notes
- Schedule 3: amended, on (applies on and from 1 February 2017), by clause 13(2) of the Fisheries (Alteration of Quota Management Areas—Freshwater Eel) Order 2016 (LI 2016/144).
- Schedule 3: amended, on (applies on and from 1 February 2017), by clause 13(3) of the Fisheries (Alteration of Quota Management Areas—Freshwater Eel) Order 2016 (LI 2016/144).
- Schedule 3: amended, on (applies on and from 1 February 2017), by clause 13(4) of the Fisheries (Alteration of Quota Management Areas—Freshwater Eel) Order 2016 (LI 2016/144).
- Schedule 3: amended, on (applies on and from 1 October 2016), by clause 7(3) of the Fisheries (Alteration of Quota Management Areas—Freshwater Eel) Order 2016 (LI 2016/144).
- Schedule 3: amended, on (applies on and from 1 October 2016), by clause 7(4) of the Fisheries (Alteration of Quota Management Areas—Freshwater Eel) Order 2016 (LI 2016/144).
- Schedule 3: amended, on , by clause 3 of the Fisheries (Schedules 3 and 6) Order 2004 (SR 2004/337).
- Schedule 3: amended, on , by clause 3 of the Fisheries (Schedules 3, 5A, and 6) Order 2004 (SR 2004/278).


